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STRINGSTRING
Mettu_2191 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2191" - PFAM: Uncharacterised protein family UPF0307 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2191PFAM- Uncharacterised protein family UPF0307; KEGG- esc-Entcl_3931 hypothetical protein; Belongs to the UPF0307 family (191 aa)    
Predicted Functional Partners:
Mettu_1657
Recombination-associated protein RdgC; May be involved in recombination (302 aa)
   
          0.518
lptA
Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (184 aa)
 
          0.517
Mettu_2190
TIGRFAM- Competence protein ComEA, helix-hairpin-helix region; KEGG- tcx-Tcr_1673 competence protein ComEA helix-hairpin-helix region (112 aa)
 
          0.504
Mettu_0932
Recombination-associated protein RdgC; May be involved in recombination (312 aa)
   
          0.502
rlmL
Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA; Belongs to the methyltransferase superfamily. RlmKL family (774 aa)
 
        0.465
Mettu_2465
TIGRFAM- Maf-like protein; HAMAP- Maf-like protein; KEGG- cja-CJA_2814 septum formation protein Maf; PFAM- Maf-like protein (191 aa)
           
  0.461
Mettu_2439
HemY domain protein; PFAM- HemY, N-terminal; KEGG- mca-MCA3062 HemY protein, putative (410 aa)
   
 
      0.440
Mettu_0089
PFAM- Protein of unknown function DUF1415; KEGG- svo-SVI_3066 hypothetical protein (188 aa)
 
          0.420
Mettu_2473
PFAM- Peptidase U62, modulator of DNA gyrase; KEGG- mca-MCA0383 PmbA protein (462 aa)
   
        0.416
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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