• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2202 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2202" - PFAM: Phosphate-selective porin O/P in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2202PFAM- Phosphate-selective porin O/P; KEGG- mca-MCA0900 hypothetical protein (496 aa)    
Predicted Functional Partners:
Mettu_2203
KEGG- gur-Gura_3894 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM- Thiosulphate-binding protein; PFAM- Bacterial extracellular solute-binding, family 1 (336 aa)
 
          0.820
Mettu_2204
KEGG- mep-MPQ_2107 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM- Thiosulphate-binding protein; PFAM- Bacterial extracellular solute-binding, family 1 (342 aa)
 
          0.604
Mettu_2205
KEGG- sulfate ABC transporter inner membrane subunit CysT; TIGRFAM- Sulphate ABC transporter, permease protein CysT; Sulphate ABC transporter permease protein 2; PFAM- Binding-protein-dependent transport systems inner membrane component (275 aa)
 
          0.570
Mettu_2201
PFAM- Protein of unknown function DUF2292 (56 aa)
              0.558
Mettu_2206
KEGG- sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM- Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2; PFAM- Binding-protein-dependent transport systems inner membrane component (288 aa)
 
          0.533
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family (347 aa)
              0.403
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]