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Mettu_2236 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2236" - KEGG: rpf:Rpic12D_4296 efflux transporter, RND family, MFP subunit in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2236KEGG- rpf-Rpic12D_4296 efflux transporter, RND family, MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (421 aa)    
Predicted Functional Partners:
Mettu_2238
PFAM- Acriflavin resistance protein; KEGG- hse-Hsero_1521 cation/multidrug efflux pump transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1041 aa)
  0.989
Mettu_2240
PFAM- Acriflavin resistance protein; KEGG- cvi-CV_2734 drug efflux pump transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1038 aa)
  0.973
Mettu_2242
KEGG- ppd-Ppro_2205 RND efflux system outer membrane lipoprotein; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (492 aa)
 
  0.954
Mettu_0195
Efflux pump membrane transporter; KEGG- noc-Noc_1827 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM- Hydrophobe/amphiphile efflux-1 HAE1; PFAM- Acriflavin resistance protein (1066 aa)
  0.854
Mettu_3505
Efflux pump membrane transporter; KEGG- mca-MCA1360 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM- Hydrophobe/amphiphile efflux-1 HAE1; PFAM- Acriflavin resistance protein (1039 aa)
  0.850
Mettu_2237
annotation not available (206 aa)
              0.845
Mettu_2235
PFAM- Transcriptional regulator, YbiH, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG- sat-SYN_00850 TetR family transcriptional regulator (215 aa)
              0.840
Mettu_3717
KEGG- reh-H16_A3356 cation/multidrug efflux pump; TIGRFAM- Hydrophobe/amphiphile efflux-1 HAE1; PFAM- Acriflavin resistance protein (1045 aa)
  0.838
Mettu_2232
PFAM- Acriflavin resistance protein; KEGG- rsl-RPSI07_mp1697 transport transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1059 aa)
  0.786
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
   
  0.776
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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