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Mettu_2244 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2244" - SMC domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2244SMC domain protein (385 aa)    
Predicted Functional Partners:
Mettu_2245
Putative uncharacterized protein (246 aa)
              0.883
Mettu_0723
Uroporphyrinogen decarboxylase (URO-D) (342 aa)
   
          0.715
Mettu_2139
Putative uncharacterized protein (75 aa)
   
          0.689
Mettu_0724
Putative uncharacterized protein (198 aa)
   
          0.557
Mettu_2246
Fis family transcriptional regulator (99 aa)
              0.544
Mettu_4023
Putative uncharacterized protein (93 aa)
   
          0.501
Mettu_2138
Putative uncharacterized protein (92 aa)
   
          0.498
Mettu_3079
Putative uncharacterized protein (84 aa)
   
          0.487
Mettu_1381
Tetratricopeptide TPR_1 repeat-containing protein (553 aa)
   
          0.464
Mettu_1264
Putative uncharacterized protein (404 aa)
   
          0.446
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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