• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2248 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2248" - Protein TonB in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2248Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (271 aa)    
Predicted Functional Partners:
Mettu_2249
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mep-MPQ_0123 MotA/TolQ/ExbB proton channel (288 aa)
 
  0.990
Mettu_2250
PFAM- Biopolymer transport protein ExbD/TolR; KEGG- mfa-Mfla_1558 biopolymer transport protein ExbD/TolR (138 aa)
 
  0.989
Mettu_0430
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mep-MPQ_1767 MotA/TolQ/ExbB proton channel (262 aa)
 
  0.958
Mettu_0429
PFAM- Biopolymer transport protein ExbD/TolR; KEGG- mfa-Mfla_1022 biopolymer transport protein ExbD/TolR (142 aa)
 
  0.935
Mettu_2379
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mca-MCA0669 MotA/TolQ/ExbB proton channel family protein (221 aa)
 
  0.920
Mettu_2307
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mca-MCA0669 MotA/TolQ/ExbB proton channel family protein (221 aa)
 
  0.915
Mettu_2251
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- rva-Rvan_3612 TonB-dependent receptor plug (915 aa)
 
  0.912
Mettu_0989
PFAM- Biopolymer transport protein ExbD/TolR; KEGG- avn-Avin_14750 biopolymer transport protein ExbD (143 aa)
 
  0.889
Mettu_2316
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG- gca-Galf_1748 TonB-dependent receptor (808 aa)
   
  0.862
Mettu_0988
PFAM- MotA/TolQ/ExbB proton channel; KEGG- pmy-Pmen_1612 MotA/TolQ/ExbB proton channel (204 aa)
   
  0.859
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (10%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >