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STRINGSTRING
Mettu_2263 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2263" - PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2263PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG- pna-Pnap_0571 redoxin domain-containing protein (196 aa)    
Predicted Functional Partners:
Mettu_2384
Peroxiredoxin; KEGG- abo-ABO_0723 oxidoreductase; PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal (200 aa)
 
 
  0.762
Mettu_2781
Magnesium chelatase; PFAM- von Willebrand factor, type A; Magnesium chelatase, ChlI subunit; KEGG- hse-Hsero_2656 Mg-chelatase subunit ChlI protein; SMART- von Willebrand factor, type A; ATPase, AAA+ type, core (629 aa)
     
        0.738
Mettu_0278
Peroxidase; KEGG- pol-Bpro_4841 peroxidase; PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal (219 aa)
 
 
  0.713
rpmI
TIGRFAM- Ribosomal protein L35; HAMAP- Ribosomal protein L35; KEGG- mca-MCA0695 ribosomal protein L35; PFAM- Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family (65 aa)
     
        0.650
trpC
KEGG- psp-PSPPH_0674 indole-3-glycerol-phosphate synthase; PFAM- Indole-3-glycerol phosphate synthase; Belongs to the TrpC family (266 aa)
   
 
    0.647
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate; Belongs to the TrpA family (267 aa)
       
    0.631
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (400 aa)
       
    0.630
Mettu_3594
Uncharacterized protein; PFAM- Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG- mca-MCA0496 hypothetical protein (300 aa)
   
        0.627
Mettu_0816
PFAM- Protein of unknown function DUF477; KEGG- tbd-Tbd_1720 hypothetical protein; overlaps another CDS with the same product name (281 aa)
     
        0.622
rpmA
TIGRFAM- Ribosomal protein L27; HAMAP- Ribosomal protein L27; KEGG- 50S ribosomal protein L27; PFAM- Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (85 aa)
     
 
    0.601
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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