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Mettu_2297 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2297" - KEGG: slt:Slit_0674 transmembrane protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2297KEGG- slt-Slit_0674 transmembrane protein (118 aa)    
Predicted Functional Partners:
Mettu_2296
PFAM- Protein of unknown function DUF1348; KEGG- aba-Acid345_2217 hypothetical protein (157 aa)
              0.535
Mettu_2298
ErfK/YbiS/YcfS/YnhG family protein; PFAM- YkuD domain; Sporulation/cell division region, bacteria; KEGG- mca-MCA0412 LysM domain-containing protein (470 aa)
              0.534
Mettu_3654
TIGRFAM- Flagellar export FliJ; KEGG- nwa-Nwat_2201 flagellar export protein FliJ (152 aa)
   
          0.459
Mettu_0051
Flagellar brake protein YcgR; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (245 aa)
   
          0.457
Mettu_0050
Flagellar brake protein YcgR; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (239 aa)
   
          0.403
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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