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STRINGSTRING
Mettu_2308 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2308" - TonB family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2308TonB family protein; KEGG- mca-MCA0441 TonB domain-containing protein; TIGRFAM- TonB, C-terminal; PFAM- Gram-negative bacterial tonB protein (259 aa)    
Predicted Functional Partners:
Mettu_2307
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mca-MCA0669 MotA/TolQ/ExbB proton channel family protein (221 aa)
 
  0.970
Mettu_2306
PFAM- Biopolymer transport protein ExbD/TolR; KEGG- mca-MCA0670 biopolymer ExbD/TolR family transporter (136 aa)
 
  0.962
Mettu_0430
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mep-MPQ_1767 MotA/TolQ/ExbB proton channel (262 aa)
 
  0.902
Mettu_2249
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mep-MPQ_0123 MotA/TolQ/ExbB proton channel (288 aa)
 
  0.876
Mettu_2316
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG- gca-Galf_1748 TonB-dependent receptor (808 aa)
   
  0.862
Mettu_2379
PFAM- MotA/TolQ/ExbB proton channel; KEGG- mca-MCA0669 MotA/TolQ/ExbB proton channel family protein (221 aa)
 
  0.857
Mettu_1703
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- ccs-CCNA_01194 TonB-dependent receptor (799 aa)
   
  0.844
Mettu_2250
PFAM- Biopolymer transport protein ExbD/TolR; KEGG- mfa-Mfla_1558 biopolymer transport protein ExbD/TolR (138 aa)
 
  0.843
Mettu_0989
PFAM- Biopolymer transport protein ExbD/TolR; KEGG- avn-Avin_14750 biopolymer transport protein ExbD (143 aa)
 
  0.838
Mettu_0429
PFAM- Biopolymer transport protein ExbD/TolR; KEGG- mfa-Mfla_1022 biopolymer transport protein ExbD/TolR (142 aa)
 
  0.836
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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