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Mettu_2334 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2334" - KEGG: tgr:Tgr7_3066 transcriptional regulator, TraR/DksA family in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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[Homology]
Score
Mettu_2334KEGG- tgr-Tgr7_3066 transcriptional regulator, TraR/DksA family (109 aa)    
Predicted Functional Partners:
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (81 aa)
   
 
  0.767
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1397 aa)
       
 
  0.746
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (337 aa)
       
 
  0.729
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1364 aa)
       
 
  0.723
Mettu_2335
KEGG- mca-MCA0468 MoxR protein, putative; PFAM- ATPase associated with various cellular activities, AAA-3; SMART- ATPase, AAA+ type, core (301 aa)
 
          0.645
Mettu_3755
RNA polymerase, sigma 32 subunit, RpoH; KEGG- nde-NIDE0990 RNA polymerase sigma factor RpoD (sigma-70); TIGRFAM- RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3 (448 aa)
       
 
  0.595
rpoS
KEGG- alv-Alvin_0780 RNA polymerase sigma-70 subunit RpoD subfamily; TIGRFAM- RNA polymerase sigma factor RpoS, proteobacteria; RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4 (342 aa)
       
 
  0.595
Mettu_2662
KEGG- RNA polymerase, sigma 70 subunit, RpoD subfamily; TIGRFAM- RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; Belongs to the sigma-70 factor family (391 aa)
       
 
  0.595
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (602 aa)
       
 
  0.595
rpoH
RNA polymerase sigma factor RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes (285 aa)
       
 
  0.595
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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