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STRINGSTRING
Mettu_2341 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2341" - PFAM: Polypeptide-transport-associated, ShlB-type in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2341PFAM- Polypeptide-transport-associated, ShlB-type; KEGG- hse-Hsero_1001 hemolysin activation/secretion protein (525 aa)    
Predicted Functional Partners:
Mettu_2340
KEGG- pin-Ping_2394 filamentous haemagglutinin outer membrane protein; TIGRFAM- Filamentous haemagglutinin, N-terminal, bacterial; PFAM- Filamentous haemagglutinin, N-terminal, bacterial; GLUG (1946 aa)
 
 
  0.947
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
 
  0.919
Mettu_0912
KEGG- mms-mma_1706 hemagglutinin-related protein; TIGRFAM- Filamentous haemagglutinin, N-terminal, bacterial; PFAM- Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial (1606 aa)
 
 
  0.858
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (215 aa)
     
        0.728
kdpB
Potassium-transporting ATPase ATP-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily (689 aa)
     
        0.721
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (699 aa)
     
        0.666
Mettu_1703
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- ccs-CCNA_01194 TonB-dependent receptor (799 aa)
     
 
  0.581
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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