STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23515.1PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: hse:Hsero_3245 TonB-dependent receptor protein. (810 aa)    
Predicted Functional Partners:
EGW23522.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.805
EGW23516.1
KEGG: hch:HCH_03572 BNR/Asp-box repeat-containing protein.
 
     0.779
EGW21662.1
KEGG: meh:M301_2530 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein.
  
 
 0.770
EGW22776.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: mca:MCA2337 TonB-dependent receptor, putative.
  
 
 0.770
EGW23397.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.770
EGW23456.1
TonB family protein; KEGG: mca:MCA0441 TonB domain-containing protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein.
  
 
 0.770
EGW20411.1
Protein TolA; TIGRFAM: Tol-Pal system, TolA; KEGG: mca:MCA1228 TolA protein, putative.
  
 
 0.770
EGW23520.1
KEGG: reh:H16_B2117 ABC-type transporter, permease component.
  
     0.733
EGW23514.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: nmu:Nmul_A0635 TonB-dependent receptor.
 
  
0.718
EGW23518.1
KEGG: reh:H16_B2118 hypothetical protein.
  
     0.658
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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