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Mettu_2402 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2402" - KEGG: zpr:ZPR_4196 hypothetical protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2402KEGG- zpr-ZPR_4196 hypothetical protein (211 aa)    
Predicted Functional Partners:
hemF
Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (304 aa)
 
            0.751
Mettu_1652
KEGG- mfa-Mfla_0477 hypothetical protein (105 aa)
   
          0.727
Mettu_2403
PFAM- Sodium-dicarboxylate symporter; KEGG- cpi-Cpin_1652 sodium-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid-cation symporter (DAACS) (TC 2.A.23) family (423 aa)
              0.620
Mettu_0128
KEGG- hypothetical protein (242 aa)
   
          0.574
Mettu_2401
PFAM- Protein of unknown function DUF466; KEGG- mep-MPQ_0381 hypothetical protein (59 aa)
              0.549
Mettu_2400
PFAM- Carbon starvation protein CstA; KEGG- mep-MPQ_0380 carbon starvation protein CstA (689 aa)
              0.549
trmL
tRNA (cytidine(34)-2’-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2’-OH of the wobble nucleotide (158 aa)
              0.428
Mettu_2404
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (833 aa)
              0.428
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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