• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2409 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2409" - Regulatory protein ArsR in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2409Regulatory protein ArsR; KEGG- alv-Alvin_3027 ArsR family transcriptional regulator; PFAM- HTH transcriptional regulator, ArsR; SMART- HTH transcriptional regulator, ArsR (104 aa)    
Predicted Functional Partners:
Mettu_2408
Rhodanese-like protein; KEGG- mca-MCA2536 rhodanese domain-containing protein; PFAM- Rhodanese-like; SMART- Rhodanese-like (147 aa)
   
        0.817
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA (155 aa)
              0.713
gpsA
KEGG- shn-Shewana3_0054 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP- Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM- NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (332 aa)
              0.713
Mettu_4037
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (420 aa)
     
      0.616
Mettu_1620
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (430 aa)
     
      0.616
Mettu_0480
ArsC family protein; KEGG- bcm-Bcenmc03_3864 NADPH-dependent FMN reductase; TIGRFAM- Conserved hypothetical protein, ArsC related; PFAM- Arsenate reductase-like; NADPH-dependent FMN reductase; Belongs to the ArsC family (295 aa)
   
   
  0.558
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (536 aa)
       
    0.445
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
         
  0.430
Mettu_3572
Hydroxyacylglutathione hydrolase., Thiosulfate sulfurtransferase; PFAM- Rhodanese-like; KEGG- nwa-Nwat_1812 rhodanese domain-containing protein; SMART- Rhodanese-like (365 aa)
   
   
  0.424
Mettu_3360
TIGRFAM- Thioredoxin; KEGG- slt-Slit_2205 thioredoxin; PFAM- Thioredoxin domain (143 aa)
   
   
  0.403
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (11%) [HD]