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Mettu_2454 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2454" - RDD domain containing protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2454RDD domain containing protein (156 aa)    
Predicted Functional Partners:
Mettu_2455
Putative uncharacterized protein (59 aa)
              0.859
Mettu_0173
Cytochrome c1 (240 aa)
   
          0.762
Mettu_0175
Ubiquinol-cytochrome c reductase iron-sulfur subunit ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (199 aa)
   
          0.710
Mettu_2183
Cytochrome c class I (220 aa)
   
          0.685
Mettu_2453
Cyclic nucleotide-binding protein (452 aa)
              0.676
Mettu_2452
Oligopeptidase A (695 aa)
              0.674
Mettu_2451
UbiD family decarboxylase (486 aa)
              0.674
Mettu_0174
Cytochrome b ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (468 aa)
   
          0.674
Mettu_2264
Putative cytochrome c4 (197 aa)
   
          0.612
ate
Putative arginyl-tRNA--protein transferase ; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (242 aa)
 
        0.558
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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