Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Peptidase U62 modulator of DNA gyrase (462 aa)
Predicted Functional Partners:
Peptidase U62 modulator of DNA gyrase (483 aa)
Putative uncharacterized protein (1333 aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (267 aa)
Putative uncharacterized protein (35 aa)
Putative uncharacterized protein (51 aa)
Uncharacterized protein family UPF0307 (191 aa)
Sigma-70 ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (602 aa)
N-carbamoylputrescine amidase (294 aa)
NAD+ synthetase (536 aa)
Cell wall hydrolase/autolysin (429 aa)
Your Current Organism:
NCBI taxonomy Id: 697282 Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96