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STRINGSTRING
Mettu_2488 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2488" - KEGG: net:Neut_1136 septum site-determining protein MinD in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Mettu_2488KEGG- net-Neut_1136 septum site-determining protein MinD; TIGRFAM- Septum site-determining protein MinD; PFAM- Cobyrinic acid a,c-diamide synthase; Belongs to the ParA family (269 aa)    
Predicted Functional Partners:
minC
Probable septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization (246 aa)
 
  0.999
minE
Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell (88 aa)
 
 
  0.999
Mettu_2486
PFAM- Protein of unknown function DUF2582; KEGG- mca-MCA3069 hypothetical protein (65 aa)
              0.775
rne
Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs; Belongs to the RNase E/G family. RNase E subfamily (819 aa)
     
      0.764
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (391 aa)
   
 
  0.760
Mettu_2466
Ribonuclease, Rne/Rng family; KEGG- mca-MCA0379 ribonuclease G; TIGRFAM- Ribonuclease E/G; PFAM- RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain (484 aa)
     
      0.675
nusG
Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination (177 aa)
     
   
  0.461
rlmB
23S rRNA (guanosine-2’-O-)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA (248 aa)
           
  0.461
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (101 aa)
           
  0.459
rpmD
KEGG- tcx-Tcr_0313 ribosomal protein L30; TIGRFAM- Ribosomal protein L30, bacterial-type; PFAM- Ribosomal protein L30p/L7e, conserved region (61 aa)
           
  0.457
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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