• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2499 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2499" - Uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2499Uncharacterized protein; KEGG- rfe-RF_0786 DNA primase (114 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
       
    0.771
Mettu_0943
KEGG- nhl-Nhal_0978 hypothetical protein (803 aa)
 
 
      0.690
Mettu_2500
PFAM- Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG- gca-Galf_2916 type I site-specific deoxyribonuclease; SMART- DEAD-like helicase, N-terminal (783 aa)
              0.580
Mettu_2501
KEGG- gca-Galf_2917 site-specific DNA-methyltransferase (adenine-specific); PFAM- DNA methylase, adenine-specific (594 aa)
              0.446
Mettu_2503
Restriction modification system protein containing a DNA specificity domain; PFAM- Restriction endonuclease, type I, S subunit, EcoBI; KEGG- vvu-VV1_2030 restriction endonuclease S subunits (615 aa)
              0.433
Mettu_2502
PFAM- Protein of unknown function DUF559; KEGG- gbm-Gbem_3620 endonuclease (180 aa)
              0.433
Mettu_2815
KEGG- dol-Dole_0882 hypothetical protein (179 aa)
   
          0.422
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]