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STRINGSTRING
Mettu_2534 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2534" - PFAM: Glycosyl transferase, family 39 in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2534PFAM- Glycosyl transferase, family 39; KEGG- slt-Slit_1368 glycosyl transferase family 39 (551 aa)    
Predicted Functional Partners:
Mettu_2531
PFAM- Glycosyl transferase, family 2; KEGG- gca-Galf_0670 glycosyl transferase family 2 (320 aa)
 
  0.982
Mettu_2528
PFAM- Polysaccharide deacetylase; KEGG- slt-Slit_1375 polysaccharide deacetylase (310 aa)
   
  0.975
Mettu_2533
PFAM- Protein of unknown function DUF6, transmembrane; KEGG- rsl-RPSI07_2044 putative small multidrug resistance transmembrane protein (123 aa)
 
   
  0.956
Mettu_2529
PFAM- NAD-dependent epimerase/dehydratase; KEGG- cvi-CV_0747 NAD-dependent epimerase/dehydratase family protein (351 aa)
 
   
  0.943
Mettu_2530
Methionyl-tRNA formyltransferase; KEGG- app-CAP2UW1_3294 formyl transferase domain protein; PFAM- Formyl transferase, C-terminal; Formyl transferase, N-terminal (325 aa)
 
        0.922
Mettu_2532
Glutamine--scyllo-inositol transaminase; KEGG- bte-BTH_I2193 aminotransferase; PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family (370 aa)
 
   
  0.904
Mettu_1783
PFAM- Glycosyl transferase, family 2; KEGG- ppf-Pput_3929 glycosyl transferase family protein (323 aa)
 
 
  0.887
Mettu_2362
Two component transcriptional regulator, winged helix family; KEGG- eba-ebA6235 DNA-binding response regulator; PFAM- Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART- Signal transduction response regulator, receiver region (219 aa)
   
   
  0.742
Mettu_1862
KEGG- mca-MCA0636 hypothetical protein (141 aa)
     
        0.602
Mettu_1891
KEGG- mca-MCA1765 sensor histidine kinase; PFAM- Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (457 aa)
   
   
  0.587
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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