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STRINGSTRING
Mettu_2536 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2536" - PFAM: Permease YjgP/YjgQ, predicted in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2536PFAM- Permease YjgP/YjgQ, predicted; KEGG- mca-MCA2101 hypothetical protein; overlaps another CDS with the same product name (357 aa)    
Predicted Functional Partners:
Mettu_2535
PFAM- Permease YjgP/YjgQ, predicted; KEGG- mca-MCA2100 hypothetical protein; overlaps another CDS with the same product name (383 aa)
 
  0.999
Mettu_2482
Molybdate-transporting ATPase; PFAM- ABC transporter-like; KEGG- mca-MCA0742 ABC transporter, ATP-binding protein; SMART- ATPase, AAA+ type, core (261 aa)
 
 
  0.991
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane (985 aa)
 
  0.891
lptA
Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm (184 aa)
 
  0.727
Mettu_2575
Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (224 aa)
     
 
    0.707
Mettu_2537
KEGG- mca-MCA2797 carbonic anhydrase (178 aa)
              0.663
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (165 aa)
     
  0.604
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (333 aa)
 
 
  0.576
mtgA
Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family (257 aa)
   
 
    0.550
Mettu_1391
KEGG- mca-MCA0101 rod shape-determining protein MreC; TIGRFAM- Rod shape-determining protein MreC, subtype; PFAM- Rod shape-determining protein MreC (339 aa)
 
      0.522
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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