STRINGSTRING
Mettu_2569 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2569" - Segregation and condensation protein B in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2569Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (213 aa)    
Predicted Functional Partners:
Mettu_2568
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (276 aa)
 
 
  0.988
Mettu_2570
TIGRFAM- Pseudouridine synthase, RsuA and RluB/E/F; PFAM- RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG- nhl-Nhal_3572 RNA-binding S4 domain protein; SMART- RNA-binding S4; Belongs to the pseudouridine synthase RsuA family (279 aa)
   
   
  0.944
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning; Belongs to the SMC family (1196 aa)
 
 
  0.838
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (332 aa)
           
  0.625
Mettu_3206
Uncharacterized protein; PFAM- RNA-binding, CRM domain; KEGG- aeh-Mlg_1978 hypothetical protein (88 aa)
     
        0.598
Mettu_0443
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (803 aa)
     
        0.587
rpsP
TIGRFAM- Ribosomal protein S16; HAMAP- Ribosomal protein S16; KEGG- saz-Sama_0889 30S ribosomal protein S16; PFAM- Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family (83 aa)
   
        0.562
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (295 aa)
 
     
  0.533
Mettu_2567
PFAM- Peptidase M50; KEGG- dak-DaAHT2_0739 peptidase M50 (219 aa)
              0.518
Mettu_2566
KEGG- maq-Maqu_2527 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM- Sua5/YciO/YrdC/YwlC; PFAM- Sua5/YciO/YrdC, N-terminal; Belongs to the SUA5 family (207 aa)
              0.516
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (15%) [HD]