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Mettu_2627 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2627" - DNA-binding protein Fis in Methylobacter tundripaludum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Mettu_2627DNA-binding protein Fis ; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters (94 aa)    
Predicted Functional Partners:
dusB
tRNA-dihydrouridine synthase B ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (327 aa)
   
        0.936
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (337 aa)
     
      0.830
purH
Bifunctional purine biosynthesis protein PurH (535 aa)
   
        0.805
prmA
Ribosomal protein L11 methyltransferase ; Methylates ribosomal protein L11 (292 aa)
   
 
  0.782
Mettu_2187
DNA polymerase I (930 aa)
     
 
  0.754
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (438 aa)
   
   
  0.750
Mettu_2632
Putative uncharacterized protein (172 aa)
              0.729
himA
Integration host factor subunit alpha ; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (98 aa)
   
 
 
  0.721
Mettu_2635
Acetyl-CoA carboxylase, biotin carboxyl carrier protein (145 aa)
   
        0.675
himD
Integration host factor subunit beta ; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (101 aa)
       
 
  0.674
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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