• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2646 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2646" - PFAM: Short-chain dehydrogenase/reductase SDR in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2646PFAM- Short-chain dehydrogenase/reductase SDR; KEGG- maq-Maqu_2497 short-chain dehydrogenase/reductase SDR (242 aa)    
Predicted Functional Partners:
Mettu_2645
TIGRFAM- 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG- mep-MPQ_1677 phosphoglycolate phosphatase; PFAM- Haloacid dehalogenase-like hydrolase (225 aa)
   
 
    0.930
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family (239 aa)
 
 
  0.927
Mettu_3300
PFAM- AMP-dependent synthetase/ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG- pfo-Pfl01_0436 AMP-dependent synthetase and ligase (603 aa)
   
  0.874
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
   
  0.870
Mettu_2647
KEGG- mca-MCA1270 hypothetical protein; TIGRFAM- FeS assembly SUF system protein SufT, putative; PFAM- Protein of unknown function DUF59 (182 aa)
              0.856
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family (963 aa)
   
 
  0.803
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
       
  0.801
Mettu_2658
CoA-binding domain protein; PFAM- CoA-binding; GCN5-related N-acetyltransferase; KEGG- gca-Galf_1381 CoA-binding domain-containing protein (893 aa)
   
  0.785
Mettu_1940
Methane monooxygenase; KEGG- tbi-Tbis_0140 oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM- Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin (345 aa)
   
  0.761
Mettu_1405
Methionine synthase; TIGRFAM- 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG- mca-MCA1545 B12-dependent methionine synthase; PFAM- Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region (1226 aa)
       
  0.756
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (17%) [HD]