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Mettu_2647 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2647" - KEGG: mca:MCA1270 hypothetical protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2647KEGG- mca-MCA1270 hypothetical protein; TIGRFAM- FeS assembly SUF system protein SufT, putative; PFAM- Protein of unknown function DUF59 (182 aa)    
Predicted Functional Partners:
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
   
 
  0.866
Mettu_2646
PFAM- Short-chain dehydrogenase/reductase SDR; KEGG- maq-Maqu_2497 short-chain dehydrogenase/reductase SDR (242 aa)
              0.856
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family (239 aa)
              0.854
Mettu_2645
TIGRFAM- 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG- mep-MPQ_1677 phosphoglycolate phosphatase; PFAM- Haloacid dehalogenase-like hydrolase (225 aa)
   
        0.839
Mettu_2997
TIGRFAM- ATPase SufC, SUF system FeS cluster assembly; PFAM- ABC transporter-like; KEGG- mca-MCA0991 FeS assembly ATPase SufC; SMART- ATPase, AAA+ type, core (251 aa)
 
   
  0.838
Mettu_2999
FeS assembly protein SufB; KEGG- mca-MCA0992 cysteine desulfurase activator complex subunit SufB; TIGRFAM- SUF system FeS cluster assembly, SufB; PFAM- SUF system FeS cluster assembly, SufBD (482 aa)
 
   
  0.816
Mettu_2996
KEGG- mca-MCA0990 FeS assembly protein SufD; TIGRFAM- SUF system FeS cluster assembly, SufD; PFAM- SUF system FeS cluster assembly, SufBD (440 aa)
 
   
  0.815
Mettu_2994
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (407 aa)
 
 
  0.606
Mettu_3391
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (301 aa)
   
   
  0.543
Mettu_2648
PFAM- Type IV pilus assembly PilZ; KEGG- tmz-Tmz1t_0639 type IV pilus assembly PilZ (217 aa)
              0.543
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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