• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2652 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2652" - PFAM: Protein of unknown function DUF2442 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2652PFAM- Protein of unknown function DUF2442; KEGG- pfo-Pfl01_1411 hypothetical protein (145 aa)    
Predicted Functional Partners:
Mettu_2653
KEGG- pfo-Pfl01_1410 hypothetical protein (75 aa)
              0.846
Mettu_2887
KEGG- pen-PSEEN5346 hypothetical protein (267 aa)
   
          0.546
Mettu_0159
PFAM- Glutaredoxin; KEGG- dma-DMR_27960 glutaredoxin (147 aa)
   
          0.500
Mettu_2786
Cobalt transporter, subunit CbtB; KEGG- hse-Hsero_2659 hypothetical protein; TIGRFAM- Cobalt transporter subunit CbtB, putative; PFAM- Cobalt transporter subunit CbtB, putative (65 aa)
   
          0.452
Mettu_4252
KEGG- noc-Noc_0284 hypothetical protein (103 aa)
   
          0.448
Mettu_0597
Helix-turn-helix domain protein; KEGG- reh-H16_B0114 XRE family transcriptional regulator; PFAM- Helix-turn-helix type 3; SMART- Helix-turn-helix type 3 (110 aa)
   
          0.423
Mettu_2651
KEGG- sfu-Sfum_2857 ATPase central domain-containing protein; PFAM- ATPase, AAA-type, core; SMART- ATPase, AAA+ type, core (334 aa)
              0.417
Mettu_2650
KEGG- sfu-Sfum_2858 hypothetical protein (829 aa)
              0.406
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]