STRINGSTRING
Mettu_2669 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2669" - Integrase family protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2669Integrase family protein (291 aa)    
Predicted Functional Partners:
Mettu_1963
Transposase (399 aa)
          0.854
Mettu_2312
No annotation available (399 aa)
          0.854
Mettu_1963
No annotation available (399 aa)
          0.854
Mettu_0273
Transposase (399 aa)
          0.854
Mettu_2668
Transposase (147 aa)
          0.853
Mettu_4370
Putative transposase (84 aa)
   
          0.759
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (772 aa)
   
   
  0.745
Mettu_4374
Transposase (135 aa)
 
          0.710
Mettu_2503
Restriction modification system protein containing a DNA specificity domain (615 aa)
   
   
  0.626
Mettu_1991
Restriction modification system DNA specificity domain protein (435 aa)
   
   
  0.626
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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