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STRINGSTRING
Mettu_2672 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2672" - PFAM: Fatty acid hydroxylase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2672PFAM- Fatty acid hydroxylase; KEGG- aeh-Mlg_0287 sterol desaturase-like protein (263 aa)    
Predicted Functional Partners:
Mettu_2673
PFAM- Glycosyl transferase, family 2; KEGG- app-CAP2UW1_2822 glycosyl transferase family 2 (229 aa)
 
 
    0.935
Mettu_2671
PFAM- Protein of unknown function DUF2064; KEGG- nhl-Nhal_0868 hypothetical protein (215 aa)
 
          0.763
Mettu_0711
PFAM- Squalene/phytoene synthase; KEGG- mca-MCA0813 squalene synthase (399 aa)
   
 
  0.649
Mettu_4009
PFAM- SNARE associated Golgi protein; KEGG- nde-NIDE1145 hypothetical protein (223 aa)
 
        0.641
Mettu_0710
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (651 aa)
     
 
  0.597
Mettu_0576
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (654 aa)
     
 
  0.597
Mettu_4173
Unspecific monooxygenase; KEGG- nmu-Nmul_A2167 cytochrome P450; PFAM- Cytochrome P450 (451 aa)
     
  0.566
Mettu_4061
PFAM- Cytochrome P450; KEGG- xau-Xaut_0387 cytochrome P450 (442 aa)
     
  0.566
Mettu_4151
Phosphoesterase; KEGG- mca-MCA2985 PAP2 superfamily protein; PFAM- Phosphatidic acid phosphatase type 2/haloperoxidase; SMART- Phosphatidic acid phosphatase type 2/haloperoxidase (174 aa)
   
  0.502
Mettu_4007
PFAM- Radical SAM; KEGG- noc-Noc_0590 radical SAM domain-containing protein (323 aa)
 
          0.483
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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