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STRINGSTRING
Mettu_2679 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2679" - PFAM: PilT protein, N-terminal in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2679PFAM- PilT protein, N-terminal; KEGG- app-CAP2UW1_1640 PilT protein domain protein (137 aa)    
Predicted Functional Partners:
Mettu_2680
KEGG- app-CAP2UW1_1641 hypothetical protein (68 aa)
              0.845
Mettu_2715
SpoVT/AbrB domain-containing protein; PFAM- Transcription regulator AbrB/SpoV, predicted; KEGG- afr-AFE_2889 transcriptional regulator, AbrB family (77 aa)
 
          0.752
Mettu_3628
KEGG- app-CAP2UW1_3238 PilT protein domain protein; TIGRFAM- Protein of unknown function DUF132; SMART- Nucleotide binding protein, PINc (139 aa)
   
          0.589
Mettu_3112
KEGG- cyh-Cyan8802_3860 hypothetical protein (66 aa)
   
          0.473
Mettu_0603
Transcriptional regulator, XRE family; KEGG- eba-ebB120 hypothetical protein; PFAM- Helix-turn-helix type 3; SMART- Helix-turn-helix type 3 (94 aa)
   
          0.469
Mettu_2681
SNF2-related protein; KEGG- hch-HCH_06999 SNF2 family DNA/RNA helicase; PFAM- SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART- DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal (1083 aa)
              0.468
Mettu_4203
Uncharacterized protein; Manually curated; KEGG- ana-all1618 hypothetical protein (186 aa)
   
          0.424
Mettu_0483
PFAM- Protein of unknown function DUF820; KEGG- npu-Npun_F3673 hypothetical protein (215 aa)
   
          0.423
Mettu_2682
KEGG- nmu-Nmul_A2260 Slp family outer membrane lipoprotein; TIGRFAM- Outer membrane lipoprotein Slp; PFAM- Outer membrane lipoprotein Slp (187 aa)
 
          0.422
Mettu_0602
PFAM- Protein of unknown function DUF891; KEGG- eba-ebA3772 hypothetical protein (105 aa)
   
          0.421
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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