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STRINGSTRING
Mettu_2682 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2682" - KEGG: nmu:Nmul_A2260 Slp family outer membrane lipoprotein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2682KEGG- nmu-Nmul_A2260 Slp family outer membrane lipoprotein; TIGRFAM- Outer membrane lipoprotein Slp; PFAM- Outer membrane lipoprotein Slp (187 aa)    
Predicted Functional Partners:
Mettu_1263
KEGG- gca-Galf_1039 pyridoxal-dependent decarboxylase; PFAM- Pyridoxal phosphate-dependent decarboxylase (486 aa)
     
 
  0.674
Mettu_0493
TIGRFAM- Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG- mca-MCA1550 succinate dehydrogenase flavoprotein subunit; PFAM- Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily (594 aa)
       
      0.612
Mettu_1861
KEGG- nmu-Nmul_A2658 hypothetical protein (261 aa)
   
          0.589
Mettu_2681
SNF2-related protein; KEGG- hch-HCH_06999 SNF2 family DNA/RNA helicase; PFAM- SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART- DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal (1083 aa)
              0.560
Mettu_0848
KEGG- nhl-Nhal_2442 hypothetical protein (683 aa)
   
          0.529
Mettu_0624
PFAM- Protein of unknown function DUF1207; KEGG- net-Neut_1663 hypothetical protein (362 aa)
   
        0.526
Mettu_0058
SMART- Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; Helicase-like, DEXD box c2 type; KEGG- mca-MCA1991 ATP-dependent helicase, putative (645 aa)
 
        0.494
Mettu_0882
KEGG- nwa-Nwat_2311 hypothetical protein (195 aa)
   
          0.487
Mettu_2090
KEGG- mca-MCA1084 hypothetical protein (403 aa)
   
          0.470
Mettu_3263
PFAM- Protein of unknown function DUF1597; KEGG- nmu-Nmul_A0439 hypothetical protein (454 aa)
   
     
  0.467
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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