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rlmN protein (Methylobacter tundripaludum) - STRING interaction network
"rlmN" - tRNA m2A37 methyltransferase in Methylobacter tundripaludum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rlmNtRNA m2A37 methyltransferase ; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity (370 aa)    
Predicted Functional Partners:
metK
Methionine adenosyltransferase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (386 aa)
     
    0.937
Mettu_2698
Type IV pilus biogenesis/stability protein PilW (253 aa)
   
   
  0.923
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (143 aa)
   
        0.921
Mettu_4037
S-adenosyl-L-homocysteine hydrolase ; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (420 aa)
         
    0.900
Mettu_1620
S-adenosyl-L-homocysteine hydrolase ; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (430 aa)
         
    0.900
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (282 aa)
   
   
  0.781
Mettu_2570
Pseudouridine synthase (279 aa)
 
      0.777
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (465 aa)
   
 
  0.752
hisS
Histidyl-tRNA synthetase (424 aa)
   
        0.747
secF
Protein-export membrane protein SecF ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (308 aa)
         
  0.735
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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