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truD protein (Methylobacter tundripaludum) - STRING interaction network
"truD" - tRNA-uridine isomerase D in Methylobacter tundripaludum
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
truDtRNA-uridine isomerase D ; Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs (339 aa)    
Predicted Functional Partners:
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (342 aa)
     
 
  0.850
rnt
Exoribonuclease T ; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (207 aa)
   
        0.827
pyrG
UTP--ammonia ligase ; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (543 aa)
   
      0.798
Mettu_1626
CTP synthase (228 aa)
   
      0.798
trmB
tRNA(m7G46)-methyltransferase ; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (229 aa)
   
 
  0.754
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (672 aa)
   
      0.712
Mettu_2589
Protein-beta-aspartate methyltransferase ; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (220 aa)
   
   
  0.711
surE
Nucleoside 5’-monophosphate phosphohydrolase ; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (251 aa)
   
   
  0.704
dusA
tRNA-dihydrouridine synthase A ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (331 aa)
 
   
  0.696
Mettu_3769
Ribosomal RNA small subunit methyltransferase B (435 aa)
     
 
  0.683
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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