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STRINGSTRING
Mettu_2806 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2806" - KEGG: see:SNSL254_p_0173 rhs family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2806KEGG- see-SNSL254_p_0173 rhs family protein; TIGRFAM- RHS repeat-associated core domain; YD repeat; PFAM- YD repeat (1462 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
  0.908
Mettu_2807
annotation not available (99 aa)
              0.826
Mettu_2808
KEGG- nhl-Nhal_0251 protein of unknown function DUF1568 (287 aa)
              0.426
Mettu_3127
TIGRFAM- Amino acid adenylation; KEGG- psb-Psyr_3722 amino acid adenylation; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; overlaps another CDS with the same product name (2224 aa)
   
 
      0.418
Mettu_2805
annotation not available (49 aa)
              0.409
Mettu_3699
KEGG- npu-Npun_F2183 amino acid adenylation domain-containing protein; TIGRFAM- Amino acid adenylation; Non-ribosomal peptide synthase; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Methyltransferase type 12; Phosphopantetheine-binding; overlaps another CDS with the same product name (4114 aa)
   
 
      0.402
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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