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cmk protein (Methylobacter tundripaludum) - STRING interaction network
"cmk" - TIGRFAM: Cytidylate kinase in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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cmkTIGRFAM- Cytidylate kinase; HAMAP- Cytidylate kinase; KEGG- mca-MCA1414 cytidylate kinase; PFAM- Cytidylate kinase region; Belongs to the cytidylate kinase family. Type 1 subfamily (218 aa)    
Predicted Functional Partners:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (733 aa)
   
 
  0.998
Mettu_2829
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (553 aa)
 
 
  0.991
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (143 aa)
   
 
  0.987
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (241 aa)
   
 
  0.987
Mettu_1597
Uracil phosphoribosyltransferase; KEGG- mca-MCA2334 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM- Phosphoribosyltransferase (168 aa)
         
  0.981
Mettu_2826
PFAM- Aminotransferase, class I/II; TIGRFAM- Histidinol-phosphate aminotransferase; HAMAP- Histidinol-phosphate aminotransferase; KEGG- gpb-HDN1F_10270 similar to histidinol-phosphate aminotransferase 1, HisC; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily (386 aa)
 
        0.947
Mettu_2825
KEGG- alv-Alvin_2084 chorismate mutase; TIGRFAM- Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM- Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT (361 aa)
   
 
  0.943
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (315 aa)
 
   
  0.931
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate; Belongs to the pantothenate synthetase family (280 aa)
 
 
    0.910
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (465 aa)
   
  0.892
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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