STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW19736.1NADH dehydrogenase (quinone); KEGG: mca:MCA1139 hydrogenase 4 subunit F; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (487 aa)    
Predicted Functional Partners:
EGW19737.1
PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; KEGG: mca:MCA1138 hydrogenase subunit.
 0.999
EGW19733.1
KEGG: mca:MCA1141 hydrogenase subunit.
 
 0.998
EGW19738.1
PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: mca:MCA1137 hydrogenase subunit.
 
 
 0.998
EGW20578.1
TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: mca:MCA1349 NADH dehydrogenase I, L subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal.
 
0.993
nuoC
NAD(P)H-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.990
EGW19732.1
NADH dehydrogenase (quinone); KEGG: mca:MCA1142 hydrogenase 4 subunit B; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase.
 
  
0.989
EGW19735.1
KEGG: mca:MCA1140 hydrogenase subunit.
 
  
 0.978
EGW22414.1
KEGG: mca:MCA1391 formate dehydrogenase, alpha subunit; TIGRFAM: Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region.
  
 0.900
nuoB
NAD(P)H-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 
 0.891
EGW22690.1
KEGG: mca:MCA2724 NAD-reducing hydrogenase, alpha subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
    
 0.860
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.