Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
VacJ family lipoprotein (253 aa)
Predicted Functional Partners:
Mammalian cell entry related domain protein (155 aa)
Toluene tolerance family protein (215 aa)
Toluene tolerance family protein (214 aa)
Exoribonuclease T ; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (207 aa)
Putative uncharacterized protein (379 aa)
Putative uncharacterized protein (260 aa)
Sulfate-transporting ATPase (275 aa)
Hopanoid biosynthesis associated membrane protein HpnM (205 aa)
Fe(3+)-transporting ATPase (266 aa)
Mammalian cell entry related domain protein (304 aa)
Your Current Organism:
NCBI taxonomy Id: 697282 Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96