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STRINGSTRING
Mettu_2885 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2885" - PFAM: Protein of unknown function DUF1425 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2885PFAM- Protein of unknown function DUF1425; KEGG- tbd-Tbd_2515 hypothetical protein (133 aa)    
Predicted Functional Partners:
Mettu_2884
KEGG- tbd-Tbd_2516 hypothetical protein (502 aa)
 
     
  0.972
Mettu_2886
Membrane lipoprotein lipid attachment site; TIGRFAM- Uncharacterised conserved lipoprotein, UCP02722; KEGG- tbd-Tbd_2514 putative lipoprotein (206 aa)
 
   
  0.917
Mettu_2887
KEGG- pen-PSEEN5346 hypothetical protein (267 aa)
 
          0.896
Mettu_3576
PFAM- Histidine triad (HIT) protein; KEGG- mca-MCA0687 hypothetical protein (135 aa)
   
   
  0.649
Mettu_3094
PFAM- Histidine triad (HIT) protein; KEGG- aeh-Mlg_1507 histidine triad (HIT) protein (112 aa)
   
   
  0.649
Mettu_2883
KEGG- mxa-MXAN_6368 hypothetical protein (160 aa)
              0.496
Mettu_0730
KEGG- svo-SVI_3119 serine/threonine protein kinase; PFAM- Serine/threonine-protein kinase-like domain; Leucine-rich repeat; SMART- Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Leucine-rich repeat, typical subtype (448 aa)
   
          0.464
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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