Mettu_2885 protein (Methylobacter tundripaludum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

Mettu_2885

Putative uncharacterized protein (133 aa)

Predicted Functional Partners:

Mettu_2884

0.970

Mettu_2886

0.896

Mettu_1139

0.658

Mettu_2887

0.538

Mettu_2883

0.522

Mettu_3919

0.456

Mettu_2808

0.434

Mettu_0595

0.431

srkA

0.408

Your Current Organism:

Methylobacter tundripaludum

NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Mettu_0595	Mettu_2884	Mettu_0595	Mettu_2884	Putative uncharacterized protein	Putative uncharacterized protein	0.570
Mettu_0595	Mettu_2885	Mettu_0595	Mettu_2885	Putative uncharacterized protein	Putative uncharacterized protein	0.431
Mettu_0595	Mettu_2886	Mettu_0595	Mettu_2886	Putative uncharacterized protein	Membrane lipoprotein lipid attachment site	0.593
Mettu_1139	Mettu_2884	Mettu_1139	Mettu_2884	Putative uncharacterized protein	Putative uncharacterized protein	0.668
Mettu_1139	Mettu_2885	Mettu_1139	Mettu_2885	Putative uncharacterized protein	Putative uncharacterized protein	0.658
Mettu_1139	Mettu_2886	Mettu_1139	Mettu_2886	Putative uncharacterized protein	Membrane lipoprotein lipid attachment site	0.542
Mettu_2808	Mettu_2884	Mettu_2808	Mettu_2884	Putative uncharacterized protein	Putative uncharacterized protein	0.405
Mettu_2808	Mettu_2885	Mettu_2808	Mettu_2885	Putative uncharacterized protein	Putative uncharacterized protein	0.434
Mettu_2883	Mettu_2884	Mettu_2883	Mettu_2884	Putative uncharacterized protein	Putative uncharacterized protein	0.522
Mettu_2883	Mettu_2885	Mettu_2883	Mettu_2885	Putative uncharacterized protein	Putative uncharacterized protein	0.522
Mettu_2884	Mettu_0595	Mettu_2884	Mettu_0595	Putative uncharacterized protein	Putative uncharacterized protein	0.570
Mettu_2884	Mettu_1139	Mettu_2884	Mettu_1139	Putative uncharacterized protein	Putative uncharacterized protein	0.668
Mettu_2884	Mettu_2808	Mettu_2884	Mettu_2808	Putative uncharacterized protein	Putative uncharacterized protein	0.405
Mettu_2884	Mettu_2883	Mettu_2884	Mettu_2883	Putative uncharacterized protein	Putative uncharacterized protein	0.522
Mettu_2884	Mettu_2885	Mettu_2884	Mettu_2885	Putative uncharacterized protein	Putative uncharacterized protein	0.970
Mettu_2884	Mettu_2886	Mettu_2884	Mettu_2886	Putative uncharacterized protein	Membrane lipoprotein lipid attachment site	0.931
Mettu_2884	Mettu_2887	Mettu_2884	Mettu_2887	Putative uncharacterized protein	Putative uncharacterized protein	0.537
Mettu_2884	Mettu_3919	Mettu_2884	Mettu_3919	Putative uncharacterized protein	Sulfatase	0.427
Mettu_2884	srkA	Mettu_2884	Mettu_2888	Putative uncharacterized protein	Serine/threonine-protein kinase SrkA ; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response	0.408
Mettu_2885	Mettu_0595	Mettu_2885	Mettu_0595	Putative uncharacterized protein	Putative uncharacterized protein	0.431

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