• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2901 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2901" - KEGG: mca:MCA0663 PhoH family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2901KEGG- mca-MCA0663 PhoH family protein; PFAM- PhoH-like protein; SMART- Nucleotide binding protein, PINc (471 aa)    
Predicted Functional Partners:
Mettu_2900
PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG- mca-MCA0664 anti-oxidant AhpCTSA family protein (156 aa)
 
          0.904
Mettu_2899
KEGG- mca-MCA0665 glycine cleavage system transcriptional repressor, putative (186 aa)
              0.886
gpsA
KEGG- shn-Shewana3_0054 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP- Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM- NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (332 aa)
            0.633
Mettu_2898
Sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; KEGG- tva-TVAG_473590 cell-surface adhesin (932 aa)
              0.578
Mettu_2897
5’-nucleotidase; KEGG- mca-MCA1322 5’-nucleotidase; PFAM- 5-nucleotidase (303 aa)
              0.578
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (6%) [HD]