• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_2913 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2913" - PFAM: Protein of unknown function DUF497 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2913PFAM- Protein of unknown function DUF497; KEGG- glo-Glov_2221 protein of unknown function DUF497 (97 aa)    
Predicted Functional Partners:
Mettu_2914
KEGG- dat-HRM2_20630 putative type II restriction enzyme (methylase subunit) (888 aa)
 
          0.870
Mettu_2912
annotation not available (69 aa)
              0.858
Mettu_2911
KEGG- dat-HRM2_20620 ATP-dependent DNA excision repair protein (helicase superfamily) (646 aa)
              0.845
Mettu_2910
PFAM- Putative helicase A859L; KEGG- dat-HRM2_20610 hypothetical protein (398 aa)
              0.845
Mettu_2915
KEGG- cja-CJA_1097 hypothetical protein (78 aa)
 
          0.791
Mettu_2916
KEGG- cyn-Cyan7425_4601 PilT protein domain protein; manually curated; TIGRFAM- Protein of unknown function DUF132 (136 aa)
 
     
  0.751
Mettu_2067
PFAM- Protein of unknown function DUF497; KEGG- ana-asl4138 hypothetical protein (111 aa)
    
          0.707
Mettu_3113
Uncharacterized protein; Manually curated; KEGG- cyh-Cyan8802_3861 hypothetical protein (84 aa)
    
          0.645
Mettu_2054
Putative transcription regulator with HTH domain; Manually curated; KEGG- slt-Slit_2794 transcriptional regulator, XRE family (135 aa)
 
          0.635
Mettu_3411
PFAM- Protein of unknown function DUF433; KEGG- ava-Ava_1741 hypothetical protein (77 aa)
    
          0.631
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (12%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >