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Mettu_3000 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3000" - Transcriptional regulator, BadM/Rrf2 family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3000Transcriptional regulator, BadM/Rrf2 family (149 aa)    
Predicted Functional Partners:
Mettu_2999
FeS assembly protein SufB (482 aa)
 
     
  0.934
Mettu_2996
FeS assembly protein SufD (440 aa)
 
     
  0.912
Mettu_2997
FeS assembly ATPase SufC (251 aa)
 
     
  0.901
Mettu_3390
Cysteine desulfurase NifS (402 aa)
   
 
  0.796
Mettu_0026
Cysteine desulfurase (368 aa)
   
 
  0.796
Mettu_2998
Putative uncharacterized protein (319 aa)
              0.789
Mettu_2993
SUF system FeS assembly protein, NifU family (150 aa)
 
   
  0.757
Mettu_3391
Nitrogen fixation protein NifU ; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (301 aa)
   
   
  0.657
Mettu_3001
DNA internalization-related competence protein ComEC/Rec2 (777 aa)
              0.651
Mettu_2647
FeS assembly SUF system protein SufT (182 aa)
 
          0.615
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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