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STRINGSTRING
Mettu_3002 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3002" - PFAM: Protein of unknown function DUF2062 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3002PFAM- Protein of unknown function DUF2062; KEGG- slo-Shew_1636 hypothetical protein (190 aa)    
Predicted Functional Partners:
Mettu_3001
KEGG- mca-MCA2627 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM- Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM- ComEC/Rec2-related protein (777 aa)
              0.747
Mettu_2362
Two component transcriptional regulator, winged helix family; KEGG- eba-ebA6235 DNA-binding response regulator; PFAM- Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART- Signal transduction response regulator, receiver region (219 aa)
     
        0.621
Mettu_1891
KEGG- mca-MCA1765 sensor histidine kinase; PFAM- Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (457 aa)
     
        0.571
Mettu_2495
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (119 aa)
     
        0.569
Mettu_3844
KEGG- two component transcriptional regulator, winged helix family; PFAM- Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART- Signal transduction response regulator, receiver region (225 aa)
     
        0.555
Mettu_3000
Transcriptional regulator, BadM/Rrf2 family; KEGG- mca-MCA0993 Rrf2 family protein; TIGRFAM- SUF system FeS cluster assembly, Rtf2-type regulator; Transcriptional regulator, Rrf2; PFAM- Transcriptional regulator, Rrf2 (149 aa)
              0.467
Mettu_2999
FeS assembly protein SufB; KEGG- mca-MCA0992 cysteine desulfurase activator complex subunit SufB; TIGRFAM- SUF system FeS cluster assembly, SufB; PFAM- SUF system FeS cluster assembly, SufBD (482 aa)
              0.467
Mettu_2998
KEGG- llo-LLO_2003 hypothetical protein (319 aa)
              0.444
Mettu_2997
TIGRFAM- ATPase SufC, SUF system FeS cluster assembly; PFAM- ABC transporter-like; KEGG- mca-MCA0991 FeS assembly ATPase SufC; SMART- ATPase, AAA+ type, core (251 aa)
              0.444
Mettu_2996
KEGG- mca-MCA0990 FeS assembly protein SufD; TIGRFAM- SUF system FeS cluster assembly, SufD; PFAM- SUF system FeS cluster assembly, SufBD (440 aa)
              0.444
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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