STRINGSTRING
Mettu_3054 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3054" - ABC-type transporter, periplasmic subunit family 3 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3054ABC-type transporter, periplasmic subunit family 3 (317 aa)    
Predicted Functional Partners:
Mettu_0119
ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system (397 aa)
 
          0.882
Mettu_0122
Transport permease protein (267 aa)
 
          0.881
Mettu_1233
ABC-type transporter, integral membrane subunit (248 aa)
 
          0.875
Mettu_0120
PQQ-dependent catabolism-associated beta-propeller protein (320 aa)
 
          0.865
Mettu_0121
ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system (246 aa)
 
          0.865
Mettu_4256
40-residue YVTN family beta-propeller repeat protein (336 aa)
 
          0.782
Mettu_4257
Polyketide cyclase/dehydrase (187 aa)
 
          0.757
Mettu_2707
Metallo-beta-lactamase family protein (304 aa)
 
          0.754
Mettu_0419
PQQ-dependent dehydrogenase, methanol/ethanol family (618 aa)
   
          0.725
Mettu_3039
Polyketide cyclase/dehydrase (176 aa)
   
          0.722
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (16%) [HD]