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Mettu_3068 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3068" - Manually curated in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3068Manually curated; KEGG- gca-Galf_1930 transcriptional regulator, AraC family (305 aa)    
Predicted Functional Partners:
Mettu_0443
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (803 aa)
         
  0.746
Mettu_3069
Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (192 aa)
 
          0.730
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (337 aa)
       
  0.640
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
 
  0.557
Mettu_3591
PFAM- HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG- dsh-Dshi_4009 LysR family transcriptional regulator (290 aa)
   
   
  0.556
Mettu_0835
PFAM- Type III secretion exporter; KEGG- hch-HCH_04371 flagellar protein FhlB cytoplasmic domain-containing protein (94 aa)
     
        0.543
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
       
  0.542
Mettu_3075
PFAM- LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG- dar-Daro_1525 LysR family transcriptional regulator (299 aa)
   
   
  0.537
Mettu_1765
PFAM- LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG- mca-MCA2456 LysR family transcriptional regulator (304 aa)
   
   
  0.488
Mettu_1053
PFAM- LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG- LysR family transcriptional regulator (307 aa)
   
   
  0.484
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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