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STRINGSTRING
Mettu_3078 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3078" - Manually curated in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3078Manually curated; KEGG- vap-Vapar_4498 transposase IS4 family protein (196 aa)    
Predicted Functional Partners:
Mettu_3077
Transposase; Manually curated; KEGG- ccs-CCNA_01874 transposase (212 aa)
 
          0.937
Mettu_4371
KEGG- cli-Clim_1571 transposase IS4 family protein (177 aa)
 
          0.811
EGW22811.1
Manually curated; KEGG- ppd-Ppro_3408 transposase, IS4 family protein (191 aa)
 
          0.803
Mettu_3643
IS4 transposase family protein; Manually curated (197 aa)
 
          0.799
Mettu_0013
PFAM- Transposase, IS4-like; KEGG- cli-Clim_1571 transposase IS4 family protein (452 aa)
 
          0.765
EGW20292.1
PFAM- Transposase, IS4-like; KEGG- cli-Clim_1571 transposase IS4 family protein (452 aa)
 
          0.765
EGW20216.1
PFAM- Transposase, IS4-like; KEGG- cli-Clim_1571 transposase IS4 family protein (452 aa)
 
          0.765
EGW19979.1
PFAM- Transposase, IS4-like; KEGG- cli-Clim_1571 transposase IS4 family protein (452 aa)
 
          0.765
EGW19923.1
PFAM- Transposase, IS4-like; KEGG- cli-Clim_1571 transposase IS4 family protein (452 aa)
 
          0.765
EGW19901.1
PFAM- Transposase, IS4-like; KEGG- cli-Clim_1571 transposase IS4 family protein (452 aa)
 
          0.765
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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