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Mettu_3078 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3078" - Transposase IS4 family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3078Transposase IS4 family protein (196 aa)    
Predicted Functional Partners:
Mettu_3077
Transposase (212 aa)
          0.891
Mettu_4371
Transposase IS4 family protein (177 aa)
          0.787
Mettu_1638
No annotation available (192 aa)
          0.778
Mettu_3643
IS4 transposase family protein (197 aa)
          0.775
Mettu_3773
No annotation available (452 aa)
          0.669
Mettu_3423
No annotation available (452 aa)
          0.669
Mettu_3346
No annotation available (452 aa)
          0.669
Mettu_3101
No annotation available (452 aa)
          0.669
Mettu_3045
No annotation available (452 aa)
          0.669
Mettu_3021
No annotation available (452 aa)
          0.669
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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