• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3087 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3087" - KEGG: gpb:HDN1F_14160 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3087KEGG- gpb-HDN1F_14160 hypothetical protein (365 aa)    
Predicted Functional Partners:
Mettu_3088
PFAM- GCN5-related N-acetyltransferase; KEGG- ttu-TERTU_0462 acetyltransferase, GNAT family (366 aa)
 
          0.912
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
     
 
    0.782
Mettu_3086
PFAM- ATP-grasp fold, DUF201-type; KEGG- gpb-HDN1F_14170 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase) (493 aa)
 
          0.681
Mettu_1083
KEGG- pmy-Pmen_0549 sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; SMART- ATPase, AAA+ type, core (628 aa)
   
     
  0.475
Mettu_3085
annotation not available (136 aa)
              0.466
Mettu_0339
KEGG- mca-MCA1689 hypothetical protein (428 aa)
   
          0.453
Mettu_0887
PFAM- Protein of unknown function DUF2231, transmembrane; KEGG- mca-MCA1825 hypothetical protein (213 aa)
   
          0.442
Mettu_3188
KEGG- ttu-TERTU_1840 methyl-accepting chemotaxis protein (202 aa)
   
          0.426
Mettu_0425
KEGG- hypothetical protein (579 aa)
   
        0.422
Mettu_0983
PFAM- Flagellar hook-length control protein; KEGG- tgr-Tgr7_1351 hypothetical protein (583 aa)
   
          0.421
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]