STRINGSTRING
Mettu_3119 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3119" - Sulfotransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3119Sulfotransferase (404 aa)    
Predicted Functional Partners:
Mettu_2996
FeS assembly protein SufD (440 aa)
       
      0.761
Mettu_3122
Glycosyltransferase, MGT family (455 aa)
 
          0.664
Mettu_2999
FeS assembly protein SufB (482 aa)
       
      0.657
Mettu_2234
Beta-lactamase domain protein (487 aa)
   
          0.608
Mettu_3120
Secretion protein HlyD family protein (264 aa)
              0.596
Mettu_1987
LamG domain protein jellyroll fold domain protein (502 aa)
   
          0.473
Mettu_3275
Putative uncharacterized protein (144 aa)
   
          0.452
Mettu_3121
Carbamoyltransferase (666 aa)
              0.446
Mettu_3908
PKD domain containing protein (588 aa)
   
          0.429
Mettu_2251
TonB-dependent receptor plug (915 aa)
   
          0.415
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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