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Mettu_3120 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3120" - PFAM: Secretion protein HlyD in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3120PFAM- Secretion protein HlyD; KEGG- nhl-Nhal_3254 efflux transporter, RND family, MFP subunit (264 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
   
  0.753
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
 
  0.705
Mettu_3121
PFAM- Carbamoyltransferase; KEGG- mlo-mlr6171 nodulation protein NolO (666 aa)
              0.610
Mettu_4284
PFAM- Protein of unknown function DUF214, permase predicted; KEGG- rca-Rcas_2537 hypothetical protein (804 aa)
   
  0.586
Mettu_4274
PFAM- Protein of unknown function DUF214, permase predicted; KEGG- nhl-Nhal_3357 protein of unknown function DUF214 (398 aa)
   
  0.586
Mettu_3962
PFAM- Protein of unknown function DUF214, permase predicted; KEGG- net-Neut_0973 hypothetical protein (384 aa)
   
  0.586
Mettu_3743
PFAM- Protein of unknown function DUF214, permase predicted; KEGG- slt-Slit_1490 protein of unknown function DUF214 (407 aa)
   
  0.586
Mettu_3119
PFAM- Sulfotransferase; Sterol-binding; KEGG- aae-aq_1088 hypothetical protein (404 aa)
              0.581
Mettu_2816
KEGG- psa-PST_3261 hypothetical protein (227 aa)
   
          0.559
Mettu_4283
Phosphonate-transporting ATPase; PFAM- ABC transporter-like; KEGG- rrs-RoseRS_3212 cyclic nucleotide-binding protein; SMART- ATPase, AAA+ type, core (232 aa)
     
    0.532
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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