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Mettu_3120 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3120" - Secretion protein HlyD family protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3120Secretion protein HlyD family protein (264 aa)    
Predicted Functional Partners:
Mettu_1592
Putative uncharacterized protein (330 aa)
   
          0.654
Mettu_1816
Integral membrane sensor signal transduction histidine kinase (565 aa)
   
          0.639
Mettu_3121
Carbamoyltransferase (666 aa)
              0.623
Mettu_0830
Type IV pilus assembly PilZ (116 aa)
   
          0.612
Mettu_3119
Sulfotransferase (404 aa)
              0.596
Mettu_1761
Transcriptional regulator, Crp/Fnr family (218 aa)
   
          0.581
Mettu_3269
Adenylate cyclase (936 aa)
   
          0.535
Mettu_0123
Putative uncharacterized protein (528 aa)
   
          0.530
Mettu_3665
Pilz domain-containing protein ; Binds the second messenger bis-(3’-5’) cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein (122 aa)
   
          0.524
Mettu_2434
Adenylate cyclase (934 aa)
   
          0.517
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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