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Mettu_3127 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3127" - TIGRFAM: Amino acid adenylation in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3127TIGRFAM- Amino acid adenylation; KEGG- psb-Psyr_3722 amino acid adenylation; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; overlaps another CDS with the same product name (2224 aa)    
Predicted Functional Partners:
Mettu_4281
PFAM- MbtH-like protein; KEGG- cyt-cce_3047 putative MbtH-like protein (73 aa)
 
  0.944
Mettu_3711
PFAM- MbtH-like protein; KEGG- sgr-SGR_452 putative MbtH-like protein (78 aa)
  0.943
Mettu_3704
PFAM- MbtH-like protein; KEGG- ami-Amir_3672 MbtH domain protein (195 aa)
 
  0.943
Mettu_3126
TIGRFAM- Amino acid adenylation; KEGG- bbe-BBR47_39840 non-ribosomal synthetase; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Methyltransferase type 12; Phosphopantetheine-binding; Thioesterase; overlaps another CDS with the same product name (1810 aa)
 
       
0.875
Mettu_3128
TIGRFAM- Amino acid adenylation; Non-ribosomal peptide synthase; KEGG- npu-Npun_R3023 amino acid adenylation domain-containing protein; PFAM- AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; overlaps another CDS with the same product name (2629 aa)
 
       
0.869
Mettu_3703
Oleoyl-(Acyl-carrier-protein) hydrolase; KEGG- aca-ACP_1148 thioesterase domain protein; PFAM- Thioesterase (275 aa)
 
  0.838
EGW20561.1
Manually curated; KEGG- npu-Npun_R2081 beta-ketoacyl synthase; PFAM- Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal (457 aa)
 
  0.811
Mettu_3713
KEGG- npu-Npun_F3359 beta-ketoacyl synthase; PFAM- Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Phosphopantetheine-binding (1600 aa)
 
  0.759
Mettu_3706
KEGG- npu-Npun_R2082 beta-ketoacyl synthase; PFAM- Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Phosphopantetheine-binding (1879 aa)
 
  0.752
Mettu_3705
PFAM- 4’-phosphopantetheinyl transferase; KEGG- npu-Npun_R2089 4’-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily (270 aa)
 
 
  0.739
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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