STRINGSTRING
Mettu_3140 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3140" - Heat shock protein DnaJ domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3140Heat shock protein DnaJ domain protein (163 aa)    
Predicted Functional Partners:
Mettu_3141
Peptidase M23 (297 aa)
              0.859
rpoS
Sigma-38 (342 aa)
              0.715
Mettu_1592
Putative uncharacterized protein (330 aa)
   
          0.516
Mettu_3139
Molybdopterin-guanine dinucleotide biosynthesis protein B (175 aa)
              0.491
Mettu_3138
Molybdenum cofactor synthesis domain protein (414 aa)
              0.491
Mettu_0439
Multi-sensor signal transduction histidine kinase (507 aa)
   
          0.451
Mettu_3545
Protein TolA (529 aa)
   
          0.434
dusA
tRNA-dihydrouridine synthase A ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (331 aa)
   
          0.424
Mettu_1136
Putative uncharacterized protein (125 aa)
   
          0.408
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (15%) [HD]