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Mettu_3178 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3178" - PFAM: ATPase, AFG1-like in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3178PFAM- ATPase, AFG1-like; KEGG- mag-amb3956 ATPase (384 aa)    
Predicted Functional Partners:
Mettu_0494
KEGG- aeh-Mlg_1335 succinate dehydrogenase iron-sulfur subunit; TIGRFAM- Succinate dehydrogenase/fumarate reductase iron-sulphur protein (261 aa)
        0.767
Mettu_0493
TIGRFAM- Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG- mca-MCA1550 succinate dehydrogenase flavoprotein subunit; PFAM- Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily (594 aa)
 
        0.744
Mettu_0491
KEGG- azl-AZL_001730 succinate dehydrogenase cytochrome b-556 subunit; TIGRFAM- Succinate dehydrogenase, cytochrome b556 subunit; PFAM- Succinate dehydrogenase, cytochrome b subunit (129 aa)
 
          0.672
Mettu_3177
KEGG- nar-Saro_0814 excinuclease ABC subunit C; PFAM- Excinuclease ABC, C subunit, N-terminal; SMART- Excinuclease ABC, C subunit, N-terminal (148 aa)
              0.643
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family (239 aa)
 
        0.624
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (142 aa)
 
        0.583
Mettu_0175
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (199 aa)
 
          0.574
rpsI
PFAM- Ribosomal protein S9; KEGG- mca-MCA0905 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (131 aa)
 
        0.460
Mettu_1809
KEGG- nhl-Nhal_3718 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM- Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM- FAD dependent oxidoreductase (406 aa)
   
          0.454
Mettu_0174
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (468 aa)
 
          0.425
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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