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Mettu_3222 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3222" - KEGG: meh:M301_1281 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3222KEGG- meh-M301_1281 hypothetical protein (152 aa)    
Predicted Functional Partners:
Mettu_3223
PFAM- Type II secretion system F domain; KEGG- meh-M301_1282 type II secretion system F domain protein (408 aa)
              0.845
Mettu_3224
KEGG- meh-M301_1283 type II secretion system protein E; PFAM- Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART- ATPase, AAA+ type, core (568 aa)
              0.749
Mettu_3221
KEGG- mmb-Mmol_1195 general secretion pathway protein H (180 aa)
              0.515
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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