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Mettu_3224 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3224" - KEGG: meh:M301_1283 type II secretion system protein E in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3224KEGG- meh-M301_1283 type II secretion system protein E; PFAM- Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART- ATPase, AAA+ type, core (568 aa)    
Predicted Functional Partners:
Mettu_3223
PFAM- Type II secretion system F domain; KEGG- meh-M301_1282 type II secretion system F domain protein (408 aa)
 
  0.983
Mettu_1871
PFAM- Type II secretion system F domain; KEGG- mca-MCA1115 general secretion pathway protein F (404 aa)
 
  0.943
Mettu_2521
PFAM- Type II secretion system F domain; KEGG- mca-MCA2095 type IV pilin biogenesis protein PilC (406 aa)
  0.934
Mettu_3221
KEGG- mmb-Mmol_1195 general secretion pathway protein H (180 aa)
 
  0.842
Mettu_2520
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (300 aa)
 
   
  0.825
Mettu_1086
Type IV pilus secretin PilQ; KEGG- mca-MCA0329 fimbrial assembly protein PilQ; TIGRFAM- Type IV pilus secretin PilQ; PFAM- Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal (785 aa)
 
 
  0.784
Mettu_1872
KEGG- mca-MCA1116 general secretion pathway protein G; TIGRFAM- General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM- Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal (157 aa)
 
  0.766
Mettu_3222
KEGG- meh-M301_1281 hypothetical protein (152 aa)
              0.749
Mettu_1359
KEGG- pca-Pcar_0381 MshA biogenesis protein MshI-1 (321 aa)
 
 
  0.720
Mettu_1880
KEGG- nhl-Nhal_3648 general secretion pathway protein D; TIGRFAM- Type II secretion system gspD; PFAM- Type II/III secretion system; NolW-like (712 aa)
 
 
  0.708
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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