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Mettu_3224 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3224" - Type II secretion system protein E in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3224Type II secretion system protein E (568 aa)    
Predicted Functional Partners:
Mettu_3223
Type II secretion system F domain protein (408 aa)
 
 
  0.988
Mettu_2521
Type II secretion system F domain protein (406 aa)
 
  0.986
Mettu_1871
Type II secretion system F domain protein (404 aa)
 
 
  0.985
Mettu_2520
Type 4 prepilin-like proteins leader peptide-processing enzyme ; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (300 aa)
 
   
  0.965
Mettu_1880
General secretion pathway protein D (712 aa)
 
 
  0.958
Mettu_1033
Type II secretion system protein E (605 aa)
   
 
 
0.914
Mettu_1363
Type II and III secretion system protein (554 aa)
 
 
  0.897
Mettu_1872
General secretion pathway protein G (157 aa)
 
  0.880
Mettu_3222
Putative uncharacterized protein (152 aa)
              0.752
Mettu_1686
Twitching motility protein (345 aa)
 
   
0.736
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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